Publications
2012
Evans B., Fiser B., Prins W. J., Rapp D., Shields A., Glass D., Superfine R. (2012). A Highly Tunable Silicone-Based Magnetic Elastomer with Nanoscale Homogeneity. Journal of Magnetism and Magnetic Materials. PMC3241051
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2011
Eastwood, B., Mair, L., and Taylor II, R. (2011). A Structured Illumination Method for Microscope Stage Tracking. International Conference on Image Processing, Computer Vision, and Pattern Recognition.1:201-207. NIHMS325150
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Evans B., Superfine R. (2011). Design Considerations for Magnetically Actuated Cilia. Biomimetic Based Applications (p. 473-498). Anne George (Ed.), Rijeka, Croatia: InTech.
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Fronczek, D., Quammen, C., Wang, H., Kisker, C., Superfine, R., Taylor II, R., Erie, D., Tessmer, I. (2011). High Accuracy Fiona-AFM Hybrid Imaging. Ultramicroscopy.111(5):350-355. PMC3179268
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Guilluy C., Swaminathan, V., Garcia-Mata R., O’Brien, E., Superfine, R., Burridge K.; (2011). The Rho GEFs LARG and GEF-H1 regulate the mechanical response to force on integrins. Nature Cell Biology. 2011 Jun; 13(6):724-729. PMC3107386
publication PubMed/ISI PDF
Jerald, J., Whitton, M., and Brooks, F. (in-press). Scene-Motion Thresholds During Head Yaw for Immersive Virtual Environments. ACM Transactions on Applied Perception. “PMC Journal in Process”
Lozoya O., Wauthier E., Turner R., Barbier C., Prestwich G., Guilak F., Superfine R., Lubkin S., Reid L. Regulation of Hepatic Stem/Progenitor Phenotype by Microenvironment Stiffness in Hydrogel Models of the Human Liver Stem Cell Niche. Biomaterials. 32(30):7389-7402. PMC3157321.
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Mair, L. O., Evans, B., Hall, A. R., Carpenter, J., Shields, A., Ford, K., Millard, M., & Superfine, R. (2011). Highly Controllable Near-Surface Swimming of Magnetic Janus Nanorods: Application to Payload Capture and Manipulation. Journal of Physics D: Applied Physics. 44(125001). NIHMS337284
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Merkel, T., Jones, S., Herlihy, K., Kersey, F., Shields, A., Napier, M., Luft, J., Wu, H., Zamboni, W., Wang, A., Bear, J., & DeSimone, J. (2011). Using Mechanobiological Mimicry of Red Blood Cells to Extend Circulation Times of Hydrogel Microparticles. Proceedings of National Academy of Science.108(2):586-591. PMC3021010
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Niethammer, M., Hart G., Pace, D., Vespa, P., Irimia, A., van Horn, J., Aylward, S., (2011, accepted), Geometric Metamorphosis, Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). “PMC Journal – In Process”
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Niethammer, M., Huang, Y., Vialard, F., (2011, accepted), Geodesic Regression for Image Time-Series, Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI). “PMC Journal – In Process”
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Pace, D., Enquobahrie, A., Yang, H., Aylward, S., Niethammer, M., (2011, accepted), Deformable image registration of sliding organs using anisotropic diffusive regularization, International Symposium on Biomedical Imaging (ISBI). PMC3141338
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Peck, T., Fuchs, H., & Whitton, M. An Evaluation of Navigational Ability Comparing Redirected Free Exploration with Distractors to Walking-in-Place and Joystick Locomotion Interfaces. Proceedings of IEEE Virtual Reality; March 19-23, 2011; Singapore. NIHMS337291
Quammen, C. & Taylor II, R. (2011). “Adapting ITK Framework to fit Parametric Image Models,” Kitware Source. (16):9-12. NIHMS325159
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Quammen, C. & Taylor II, R. (2011). “Grid voxelization with partial volume effects in VTK.” VTK Journal. March. NIHMS325155 “not excepted by PMC
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Shen, K; Tolbert, C.E., Guilluy, C., Swaminathan, V.S., Berginski, M.E., Burridge, K., Superfine, R., Campbell, S.L. The Vinculin C-terminal Hairpin Mediates F-actin Bundle Formation, Focal Adhesion, and Cell Mechanical Properties. Journal of Biological Chemistry, Vol. 286, No. 52, pp. 45103–45115
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Spero, R., Sircar, R., Shubert, R., Taylor II, R., Wolberg, A., Superfine, R. (2011). Nanoparticle Diffusion Measures Bulk Clot Permeability. Biophysical Journal. 101(1-8):943-950. PMC3175063
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Stephens, A., Haase, J., Vicci, L., Taylor II, R., and Bloom, K. (2011). Cohesin, condensin, and the intramolecular centromere loop together generate the mitotic chromatin spring. Journal of Cell Biology.193(7):1167-1180. “PMC Journal – In Process
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Swaminathan, V., Mythreye, K., O’Brien, E., Berchuck, A., Blobe, G., Superfine, R. (2011). Mechanical stiffness grades metastatic potential in patient tumor cells and in cancer cell lines. Cancer Research; 71(5) August 1, 2011. NIHMS337293
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2010
Campbell, R., Aleman, M., Gray, L., Falvo, M., & Wolberg, A. (2010). Flow Profoundly Influences Fibrin Network Sturcture: Implications for Fibrin Formation and Clot Stability in Hemostasis. Journal of Thrombosis and Haemostasis. 104(6):1281-1284. PMC3236083
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Chehetri, R., Carpenter, J., Superfine, R., Randell, S., & Oldenburg, A. (2010). Magnetomotive optical coherence elastography for relating lung structure and function in cystic fibrosis. Proceedings of SPIE. Vol. 7554, 755420. NIHMS337222
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Cribb, J., Meehan, T., Shah, S., Skinner, K. & Superfine, R. (2010). Cylinders vs. Spheres: Biofluid Shear Thinning in Driven Nanoparticle Transport. Annals of Biomedical Engineering. 38(11):3311-3322. NIHMS223067
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Falvo, M., Gorkun, O., & Lord. S. (2010). The molecular origins of the mechanical properties of fibrin. Biophysical Chemistry. Nov;152(1-3):15-20. PMC2975759
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Feasel, J., Whitton, M., Kassler, L., Brooks, F., and Lewek, M. The Integrated Virtual Environment Rehabilitation Treadmill System. IEEE Transactions on Neural Systems & Rehabilitation Engineering.19:290-297. “PMC Journal – In Process”
Feng, D., Kwock, L., Lee, Y., & Taylor II, R. (2010). Linked Exploratory Visualizations for Uncertain MR Spectroscopy Data. Proceedings of the Conference on Visualization and Data Analysis 2010, (SPIE): 12 pages.
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Feng, D., Lee, Y., Kwock, L., & Taylor II, R. (2010). Matching Visual Saliency to Confidence in Plots of Uncertain Data. IEEE Transactions on Visualization and Computer Graphics (Proceedings Visualization/Information Visualization). 16(6):980-989. PMC3179257
publication PubMed/ISI
Hackney, Z., Mair, L., Skinner, K., Washburn, S. (2010). Photoconductive and polarization properties of individual CdTe nanowires. Materials Letters.64(18) 2016-2018. PMC2920430
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Hall, A. R., An, L., Liu, J., Vicci, L., Falvo, M. R., Superfine, R., Washburn, S. (2010). Experimental Measurement of Single-Wall Carbon Nanotube Torsional Properties (vol 96, 256102, 2006). Physical Review Letters.105(6). NIHMS344445
Hart, G., Shi, Y., Zhu, H., Sanchez, M., Styner, M., and Niethammer, M. (2010). DTI Longitudinal Atlas Building as an Average of Growth Models. Medical Image Computing and Computer Assisted Intervention, Workshop on Spatio-Temporal Image Analysis for Longitudinal and Time-Series Image Data. NIHMS337251
Hill, D., Swaminathan, V., Estes, A., Cribb, J., O’Brien, E., Davis, C., Boucher, R., & Superfine, R. (2010). Force Generation and Dynamics of Individual Cilia under External Loading. Biophysical Journal 6:98(1): 57-66. PMC2800978
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Houser, J., Hudson, N., Ping, L., O’Brien, E., Superfine, R., Lord, S., & Falvo, M. (2010). Evidence that αC region is origin of low modulus, high extensibility, and strain stiffening in fibrin fibers. Biophysical Journal. 99(9):3038-3047. PMC2965937
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Hudson, N., Houser, J., O’Brien, E., Taylor, R., Superfine, R., Lord, S., & Falvo, M. (2010). Stiffening of Individual Fibrin Fibers Equitably Distributes Strain and Strengthens Networks. Biophysical Journal 98(8): 1632-1640. PMC2856168
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Liu, X., Davis, B., Niethammer, M., Pizer, S., Mageras, G. (2010). Prediction-driven respiratory motion atlas formation for 4D image-guided radiation therapy in lung. MICCAI, International Workshop on Pulmonary Image Analysis. NIHMS337269
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Niethammer, M., Borland, D., Marron, S. , Woosley, J., Thomas, N. (2010). Appearance Normalization of Histology Slides. MICCAI, Workshop on Machine Learning in Medical Imaging. NIHMS337285
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Nunes, J., Herlihy, K., Mair, L., Superfine, R., & DeSimone, J. (2010). Multifunctional shape and size specific magneto-polymer composite particles. Nano Letters 10(4): 1113-1119.
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Peck, T., Fuchs, H., & Whitton, M. (2010). Improved Redirection with Distractors: A Large Scale Real Walking Locomotion System and its Effect on Navigation in Virtual Environments. Proceedings of IEEE Virtual Reality 2010 (Waltham, MA March 2010), 35-38.
Shields, A. R., Fiser, B. L., Evans, B.A., Falvo, M.R., Washburn, S., Superfine, R. (2010). Biomimetic cilia arrays generate simultaneous pumping and mixing regimes. Proceedings of the National Academy of Sciences 107(36): 15670-15675. PMC2936597
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Shields, A.R., Fiser, B.L., Evans, B.A., Falvo, M.R., Washburn, S., Superfine, R. Pumping and Mixing in Biomimetic Cilia Generated Flows. Proceeding of the 2nd European Conference on Microfluidics. Microfluidics 2010.
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Taylor II, R. M., Jerald, J., VanderKnyff, C., Wendt, J., Borland, D., Marshburn, D., Sherman, W. R., Whitton, M. C. (2010). Lessons about Virtual-Environment Software Systems from 20 years of VE building. Presence 19(2): 163-178. PMC2887604
Wendt, J., Whitton, M. C., & Brooks, F. B. (2010). GUD WIP: Gait-Understanding-Driven Walking-In-Place.Proceedings of IEEE Virtual Reality 2010 (Waltham, MA March 2010), 51-58.
2009
Campbell, R. A., Overmyer, K. A., Sheridan, B. C., Selzman, C. H., & Wolberg, A. S. (2009). Contributions of extravascular and intravascular cells to fibrin network formation, structure, and stability. Blood. 2009 Nov 26;114(23):4886-96. Epub 2009 Oct 1. PMID: 19797520 PMCID: PMC2786294
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Carlisle, C. R., Coulais, C., Namboothiry, M., Carroll, D. L., Hantgan, R. R., & Guthold, M. (2009). The mechanical properties of individual, electrospun fibrinogen fibers. Biomaterials 30(6): 1205-1213.
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Chourasia, A., & Taylor II, R. (2009). IEEE Visualization 2008 Design Contest. IEEE CG&A Visualization Viewpoints.
Darling, E. M., P. E. Pritchett, Evans, B., Superfine, R., Zausher, S., & Guilak, F. (2009). Mechanical Properties and Gene Expression of Chondrocytes on Micropatterned Substrates Following Dedifferentiation in Monolayer. Cellular and Molecular Bioengineering 2(3): 395-404. PMC2898162
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Dedeugd, C., Wankhede, M., & Sorg, B. S. (2009). Multimodal optical imaging of microvessel network convective oxygen transport dynamics. Applied Optics 48(10): D187-197.
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Feng, D., Kwock, L., Lee, Y. Z., & Taylor, R. M. (2009). Evaluation of Glyph-based Multivariate Volume Visualization Techniques. Proceedings of the 6th Symposium on Applied Perception in Graphics and Visualization 2009: 61-68. PMC3087293
Fisher, J. K., Ballenger, M., O’Brien, E. T., Haase, J., Superfine, R., & Bloom, K. (2009). DNA relaxation dynamics as a probe for the intracellular environment. Proceedings of the National Academy of Sciences 106(23): 9250-9255. PMC2695107
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Fricks, J., Yao, L. X., Elston, T. C., & Forest, M. G. (2009). Time-Domain Methods for Diffusive Transport in Soft Matter. SIAM Journal on Applied Mathematics 69(5): 1277-1308.
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Ghosh, S., Dutta, S., Gomes, E., Carroll, D., D’Agostino Jr., R., Olson, J., Guthold, M., & Gmeiner, W. H. (2009). Increased heating efficiency and selective thermal ablation of malignant tissue with DNA-encased multiwalled carbon nanotubes. ACS Nano 3(9): 2667-2673. PMC2748720
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Grubb, B. R., Rogers, T. D., Boucher, R. C., & Ostrowski, L. E. (2009). Ion transport across CF and normal murine olfactory and ciliated epithelium. American Journal of Physiology – Cell Physiology 296(6): C1301-1309. PMC2692423
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Hinczewski, M., Schlagberger, X., Rubinstein, M., Krichevsky, O., Netz, R. R. (2009). End-Monomer Dynamics in Semiflexible Polymers. Macromolecules 42(3): 860-875.
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Jerald, J., & Whitton, M. (2009). Relating Scene-Motion Thresholds to Latency Thresholds for Head-Mounted Displays. Proceedings of IEEE Virtual Reality Lafayette, LA. March 211-218. PMC3095496
Lindley, B., Howell, E. L., Smith, B. D., Rubinstein, G. J., Forest, M. G., Mitran, S. M., Hill, D. B., & Superfine, R. (2009). Stress communication and filtering of viscoelastic layers in oscillatory shear. Journal of Non-Newtonian Fluid Mechanics 156(1-2): 112-120.
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Livraghi, A., Grubb, B. R., Hudson, E. J., Wilkinson, K. J., Sheehan, J. K., Mall, M. A., O’Neal, W. K., Boucher, R. C., & Randell, S. H. (2009). Airway and lung pathology due to mucosal surface dehydration in {beta}-epithelial Na+ channel-overexpressing mice: role of TNF-{alpha} and IL-4R{alpha} signaling, influence of neonatal development, and limited efficacy of glucocorticoid treatment. The Journal of immunology 182(7): 4357-4367. PMC2659461
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Mair, L., Ford, K., Alam, R., Kole, R., Fisher, M., & Superfine, R. (2009). Size-Uniform 200 nm Particles: Fabrication and Application to Magnetofection. Journal of Biomedical Nanotechnology 5: 182-191. PMC2818021
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Mair, L., Skinner, K., Donley, C.L., Superfine, R. (2009). Electrodeposited Au-CdTe-Au nanowires: solution-based control over Cd/Te stoichiometry. Electrochemical Society Transactions(19(3)): 99-109.
Peck, T. M., Fuchs, H., & Whitton, M. C. (2009). Evaluation of Reorientation Techniques and Distractors for Walking in Large Virtual Environments. Transactions on Visualization and Computer Graphics 15(3): 383-394. PMC2844119
Zach, C., Niethammer, M., & Frahm, J. M. (2009). Continuous maximal flows and Wulff Shapes: Applications to MRFs. Proceedings of the Conference on Computer Vision and Pattern Recognition (CVPR).
Zach, C., Shan, L., & Niethammer, M. (2009). Globally optimal Finsler active contours. Proceedings of the Pattern Recognition Symposium of the German Association for Pattern Recognition (DAGM).
2008
Button, B. and R. C. Boucher (2008). “Role of mechanical stress in regulating airway surface hydration and mucus clearance rates.” Respir Physiol Neurobiol 163(1-3): 189-201.
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Campbell, R. A., K. A. Overmyer, et al. (2008). “Cellular procoagulant activities dictate clot structure as a function of distance from the cell surface.” ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY 28(6): E68-E68.
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Davis, C.W. and B.F. Dickey. Regulated airway goblet cell mucin secretion. Annu Rev Physiol. 2008. 70: p. 487-512.
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Desai, K.V., T.G. Bishop, L. Vicci, O.B. , E. T., Sr., R.M. Taylor, 2nd, and R. Superfine. Agnostic particle tracking for three-dimensional motion of cellular granules and membrane-tethered bead dynamics. Biophys J. 2008. 94(6): p. 2374-84. PMC: 2257905
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Falvo, M.R., D. Millard, E.T. O’Brien Iii, R. Superfine, and S.T. Lord. Length of tandem repeats in fibrin’s alphaC region correlates with fiber extensibility. J Thromb Haemost. 2008. PMC: 2655637
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Feasel, J., M.C. Whitton, and J.D. Wendt. LLCM-WIP: Low Latency, Continuous -Motion Walking-In-Place. Proceedings of IEEE Symposium on 3D User Interfaces. 2008. 97-104. Feasel2008.
Feng, D., Y. Lee, L. Kwock, and Taylor R.M. Ii. Multivariate Scalar Volume Visualization for Relationship and Value Estimation. Transactions on Visualization and Computer Graphics. 2008.
Hohenegger, C. and M.G. Forest. Two-bead microrheology: modeling protocols. Phys Rev E Stat Nonlin Soft Matter Phys. 2008. 78(3 Pt 1): p. 031501. PMC2692253
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Huang, B., S. A. Jones, et al. (2008). “Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution.” Nat Methods 5(12): 1047-52.
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Jerald, J., T.M. Peck, F. Steinicke, and M. Whitton. Sensitivity to Scene Motion for Phases of Head Yaws. Proceedings of Applied Perception in Graphics and Visualization. 2008.
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Kalpit V. Desai, T. Gary Bishop, Leandra Vicci, E. Timothy O’Brien, Sr., Russell M. Taylor, II and Richard Superfine, “Agnostic Particle Tracking for Three-Dimensional Motion of Cellular Granules and Membrane-Tethered Bead Dynamics,” Biophysical Journal, 94. pp. 2374-2384. 2008. PMC2257905
Kharlampieva, E., J.F. Ankner, M. Rubinstein, and S.A. Sukhishvili. pH-induced release of polyanions from multilayer films. Phys Rev Lett. 2008. 100(12): p. 128303. PMID: 18517917
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Lan, Y., T. C. Elston, et al. (2008). “Elimination of fast variables in chemical Langevin equations.” J Chem Phys 129(21): 214115. PMID: 19063552
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Lindley, B., E. L. Howell, et al. (2009). “Stress communication and filtering of viscoelastic layers in oscillatory shear.” Journal of Non-Newtonian Fluid Mechanics 156(1-2): 112-120.
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Lloyd, B., N. Govindaraju, et al. (2008). “Logarithmic Perspective Shadow Maps.” ACM Transactions on Graphics 27(4).
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Mihalik, J.P., L. Kohli, and M.C. Whitton. Do the physical characteristics of a virtual reality device contraindicate its use for balance assessment? J Sport Rehabil. 2008. 17(1): p. 38-49. 18270385
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Mitran, S., M.G. Forest, B. Lindley, L. Yao, and D.B. Hill. Extensions of the Ferry shear wave model for active linear and nonlinear microrheology. Non-Newtonian Fluid Mechanics. 2008.
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Nie, Z., D. Fava, M. Rubinstein, and E. Kumacheva. “Supramolecular” assembly of gold nanorods end-terminated with polymer “pom-poms”: effect of pom-pom structure on the association modes. J Am Chem Soc. 2008. 130(11): p. 3683-9. PMID: 18298120
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O’Brien, E.T., 3rd, M.R. Falvo, D. Millard, B. Eastwood, R.M. Taylor, 2nd, and R. Superfine. Ultrathin self-assembled fibrin sheets. Proc Natl Acad Sci U S A. 2008. 105(49): p. 19438-43. PMID: 19052234 PMCID: 2614779
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Tim O’Brien, E., J. Cribb, D. Marshburn, R.M. Taylor, 2nd, and R. Superfine. Chapter 16: Magnetic manipulation for force measurements in cell biology. Methods Cell Biol. 2008. 89: p. 433-50.
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Peck, T.M., M.C. Whitton, and H. Fuchs, Evaluation of Reorientation Techniques for Walking in Large Virtual Environments, in Proceedings of IEEE Virtual Reality. 2008: Reno, NV. p. 121-127.
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Peck, T.C., M.C. Whitton, and H. Fuchs. Evaluation of Reorientation Techniques for Walking in Large Virtual Environments. Virtual Reality Conference, 2008. VR ’08. IEEE. 2008: p. 121-127.
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Quammen, C.W. and R.M. Taylor II. cover image on Current Biology. 2008.
Quammen, C.W., A.C. Richardson, J. Haase, B.D. Harrison, R.M. Taylor II, and K.S. Bloom. FluoroSim: A Visual Problem-Solving Environment for Fluorescence Microscopy, in proceedings of the Eurographics Workshop on Visual Computing for Biomedicine, Delft, Netherlands, Oct. 6-7, 2008, pp. 150–158. PMC2860625
Shusharina, N.P. and M. Rubinstein. Concentration regimes in solutions of polyelectrolyte stars. Macromolecules. 2008. 41(1): 203-217
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Sonnenwald, D.H., M.C. Whitton, and K. Maclaughlin, Evaluation of a scientific collaboratory system: Investigating a collaboratory’s potential before deployment, in Science on the Internet, G. Olson, A. Zimmerman, and N. Bos, Editors. 2008, MIT Press: Boston. p. TBD.
Spero, R.C., L. Vicci, J. Cribb, D. Bober, V. Swaminathan, E.T. O’Brien, S.L. Rogers, and R. Superfine. High throughput system for magnetic manipulation of cells, polymers, and biomaterials. Rev Sci Instrum. 2008. 79(8): p. 083707. PMID: 19044357 PMCID: 2748383
R.C. Spero, R. S., A. Wolberg, S.T. Lord, R. Superfine (2008). “High Throughput Screening of Fibrin Clots: Transport and Mechanics Measured by Microbeads.” Blood Abstracts.
Richard Superfine, D.H., Vinay Swaminathan, E. Timothy O’Brien, Ric Boucher; Brian Button, Ashley Estes. Stall Force and Response of Lung Cilia. American Physical Society, 2008 APS March Meeting. 2008.
Taylor, A. C. a. R. (2009). IEEE Visualization 2008 Design Contest. IEEE CG&A Visualization Viewpoints. Vol. 29, No. 3: pp. 86-87.
Taylor, R. C. S. a. R. M. (2008). “Scalar Potential Topography Can Simplify Interpretation of 2D Vector Fields.” UNC Computer Science Technical Report #RT08-008.
Taylor, R. M., 2nd (2008). Haptics for Scientific Visualization. Haptic Rendering: Foundations, Algorithms, and Applications. M. Lin and M. Otaduy, A. K. Peters LTD.
Visnapuu, M. L., T. Fazio, et al. (2008). “Parallel arrays of geometric nanowells for assembling curtains of DNA with controlled lateral dispersion.” Langmuir 24(19): 11293-11299. PMID: 18788761
Wen Qi, R. M. T. I., Chris Healey, Jean-Bernard Martens (2008). 3D Interaction with Scientific Data through Virtual Reality and Tangible Interfacing User Centered Design for Medical Visualization, Idea Group Publishing.
Whitton, M.C. and S. Razzaque, Locomotion, in HCI Beyond the GUI: Design for Haptic, Speech, Olfactory and Other Nontraditional Interfaces, P. Kortum, Editor. 2008, Morgan Kaufmann: Burlington, MA. p. 107-146.
Whitton, M. and F. Brooks, Evaluating VE Component Technologies, in VE Components and Training Technologies, D. Nicholson, J. Cohn, and D. Schmorrow, Editors. in press, Praeger Security International: Westport, CN. p. TBD.
Whitton, M. and J. D. Wendt (2008). Modeling and Rendering. Virtual Environments for Training and Education: Developments for the Military and Beyond. D. Nicholson, D. Schmorrow and J. Cohen. Westport, CN, Praeger Security International. 2: 15-20.
Whitton, M. and R.B. Loftin, Section Perspective: Virtual Environment Component Technologies, in VE Components and Training Technologies, D. Nicholson, J. Cohn, and D. Schmorrow, Editors. in press, Praeger Security International: Westport, CN. p. TBD.
Wong, O.-K., Guthold, M., Erie, D. A., Gelles, J. (2008) “Interconvertable lactose repressor-DNA looped complexes revealed by single-molecule experiments” PLOS Biology 6(9):e232, 2028-2042. PMID: 18828671
Zuo, P., M. Picher, S.F. Okada, E.R. Lazarowski, B. Button, R.C. Boucher, and T.C. Elston. Mathematical model of nucleotide regulation on airway epithelia. Implications for airway homeostasis. J Biol Chem. 2008. 283(39): p. 26805-19. PMID: 18662982
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2007
Abdullah, L.H. and C.W. Davis. Regulation of airway goblet cell mucin secretion by tyrosine phosphorylation signaling pathways. Am J Physiol Lung Cell Mol Physiol. 2007. 293(3): p. L591-9. 17616647
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Borland, D. and M.R. Taylor, 2nd. Rainbow color map (still) considered harmful. IEEE Comput Graph Appl. 2007. 27(2): p. 14-7. 17388198
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Boucher, R.C. Evidence for airway surface dehydration as the initiating event in CF airway disease. J Intern Med. 2007. 261(1): p. 5-16. 17222164
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Boucher, R.C. Airway surface dehydration in cystic fibrosis: pathogenesis and therapy. Annu Rev Med. 2007. 58: p. 157-70. 17217330
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Boucher, R.C. Cystic fibrosis: a disease of vulnerability to airway surface dehydration. Trends Mol Med. 2007. 13(6): p. 231-40. 17524805
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Boucher, R.C. Evidence for airway surface dehydration as the initiating event in CF airway disease. J Intern Med. 2007. 261(1): p. 5-16. 17222164
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Bouzarth, E.L., A. Brooks, R. Camassa, H. Jing, T.J. Leiterman, R.M. McLaughlin, R. Superfine, J. Toledo, and L. Vicci. Epicyclic orbits in a viscous fluid about a precessing rod: theory and experiments at the micro- and macro-scales. Phys Rev E Stat Nonlin Soft Matter Phys. 2007. 76(1 Pt 2): p. 016313. 17677569
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Burette, A., D. Feng, D. Marshburn, D. Jen, R. Weinberg, and R.M.T. II. ToolBox: Stepping into the third dimension. Journal of Neuroscience. 2007. 27: p. 12757 – 12760.
Burns, E., S. Razzaque, M. Whitton, and F. Brooks. MACBETH: The avatar which I see before me and its move-ment toward my hand (Poster Abstract). in IEEE Virtual Reality 2007. 2007. Charlotte, NC: IEEE.
Button, B., M. Picher, and R.C. Boucher. Differential effects of cyclic and constant stress on ATP release and mucociliary transport by human airway epithelia. J Physiol. 2007. 580(Pt. 2): p. 577-92. 17317749
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Cribb, J., D. Hill, R.M. Taylor II, L. Vicci, J.K. Fisher, K. Desai, M.G. Forest, and R. Superfine. Nonlinear Rheology of Entangled Lambda-DNA Solutions Via Driven Microbead Rheology. in Annual Biophysical Society Meeting. 2007. Baltimore, MD.
Cribb, J., B. David, R.M. Taylor, L. Vicci, J. Fisher, K.V. Desai, M.G. Forest, and R. Superfine. Nonlinear rheology of entangled lambda-DNA solutions via driven microbead rheology. Biophysical Journal. 2007: p. 638A-638A. ISI:000243972404458
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Desai, K.V., E.T. O’Brien, J. Cribb, and R. Superfine. Cellular Nonlinear creep response depends on membrane anchoring: a magnetic force study. in Biophysical Society Meeting. 2007. Baltimore, Maryland: Biophysical Journal.
Desai, K.V., E.T. O’Brien, J. Cribb, and R. Superfine. Cellular Nonlinear creep response depends on membrane anchoring: a magnetic force study. Biophysical Journal. 2007: p. 420a-420a. ISI:000243972402530
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Eastwood, B. and R.M. Taylor. Occlusion removal in video microscopy. Computer Analysis of Images and Patterns, Springer Berlin. 2007. 4673: p. 125–132.
Evans, B.A., A.R. Shields, R.L. Carroll, S. Washburn, M.R. Falvo, and R. Superfine. Magnetically actuated nanorod arrays as biomimetic cilia. Nano Lett. 2007. 7(5): p. 1428-34. 17419660
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Feng, D., D. Marshburn, D. Jen, R.J. Weinberg, R.M. Taylor, 2nd, and A. Burette. Stepping into the third dimension. J Neurosci. 2007. 27(47): p. 12757-60. 18032646
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Fisher, J.K., L. Vicci, K. Bloom, E.T. O’Brien, C.W. Davis, R.M. Taylor II, and R. Superfine, Magnetic Manipulation for the Biomedical Sciences, in Handbook of Nanosciences, Engineering, and Technology, Second Edition. 2007, CRC Press LLC: Boca Raton.
Glencross, M., C. Jay, J. Feasel, L. Kohli, M.C. Whitton, and R. Hubbold. Effiective Cooperative Haptic Interaction over the Internet. in Proceedings of IEEE Virtual Reality 2007. 2007.
M. Guthold, W. Liu, E. A. Sparks, L. M. Jawerth, L. Peng, M. Falvo, R. Superfine, R. R. Hantgan, S. T. Lord (2007) “A comparison of the mechanical and structural properties of fibrin fibers with other protein fibers” Cell Biochemistry and Biophysics 49, 165-181.
Guthold, M., W. Liu, E.A. Sparks, L.M. Jawerth, L. Peng, M. Falvo, R. Superfine, R.R. Hantgan, and S.T. Lord. A comparison of the mechanical and structural properties of fibrin fibers with other protein fibers. Cell Biochem Biophys. 2007. 49(3): p. 165-81. 17952642
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Hall, A.R., M.R. Falvo, R. Superfine, and S. Washburn. Electromechanical Response of Single-Walled Carbon Nanotubes to Torsional Strain in a Self-Contained Device. Nature Nanotechnology. 2007. 2: p. 413-416.
Hickey, A.J., H.M. Mansour, M.J. Telko, Z. Xu, H.D. Smyth, T. Mulder, R. McLean, J. Langridge, and D. Papadopoulos. Physical characterization of component particles included in dry powder inhalers. I. Strategy review and static characteristics. J Pharm Sci. 2007. 96(5): p. 1282-301. 17455324
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Hirsh, A.J., J.R. Stonebraker, C.A. van Heusden, E.R. Lazarowski, R.C. Boucher, and M. Picher. Adenosine deaminase 1 and concentrative nucleoside transporters 2 and 3 regulate adenosine on the apical surface of human airway epithelia: implications for inflammatory lung diseases. Biochemistry. 2007. 46(36): p. 10373-83. 17696452
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Jerald, J., A. Fuller, A. Lastra, M.C. Whitton, L. Kohli, and F.P. Brooks. Latency Compensaation by Horizontal Scanline Selection for Head-Mounted Displays. in Proceediings of SPIE Vol 6490 Stereoscopic Displays and Virtual Reality Systems. 2007.
Kreda, S.M., S.F. Okada, C.A. van Heusden, W. O’Neal, S. Gabriel, L. Abdullah, C.W. Davis, R.C. Boucher, and E.R. Lazarowski. Coordinated release of nucleotides and mucin from human airway epithelial Calu-3 cells. J Physiol. 2007. 584(Pt 1): p. 245-59. 17656429
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Liu, W., Bonin, K. Guthold, M. (2007) “An easy and direct method for calibrating AFM lateral force measurements” Review of Scientific Instruments 78, 063707 (7 pages)
Mitran, S. Computational model of mucociliary clearance – Relevance to therapy. Pediatric Pulmonology. 2007: p. 111-112. ISI:000250105000010
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Mitran, S.M. Metachronal wave formation in a model of pulmonary cilia. Comput Struct. 2007. 85(11-14): p. 763-774. 19169426
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O’Brien, E.T., III, B. Wilde, S. Massenburg, K. Desai, R.M. Taylor, II, D. Marshburn, and R. Superfine. Cellular Nonlinear creep response depends on membrane anchoring: a magnetic force study. in Biophysical Society Meeting. 2007. Baltimore, Maryland: Biophysical Journal.
Peng, L., Stephens, B. J., Bonin, K., Cubicciotti, R., Guthold, M., (2007) “NanoSelection® – a Novel, Single-Cycle Method to Select Individual Aptamer Species from a Small Pool of Random Oligonucleotides” Microscopy Research and Technique 70, 372-381
Peng, L., B.J. Stephens, K. Bonin, R. Cubicciotti, and M. Guthold. A combined atomic force/fluorescence microscopy technique to select aptamers in a single cycle from a small pool of random oligonucleotides. Microsc Res Tech. 2007. 70(4): p. 372-81. 17262788
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Rubinstein, M. Polymer physics of the perciliary layer. Pediatric Pulmonology. 2007: p. 112-113. ISI:000250105000011
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Sears, P.R., K. Thompson, M.R. Knowles, and C.W. Davis. Empirical model of ciliary dynamics for human airway epithelium. Biophysical Journal. 2007: p. 486A-486A. ISI:000243972403118
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Shields, A.R. Magnetically Actuated Nanorod Arrays as Biomimetic Silia. Nano Letters. 2007. 7(5): p. 1428-1434.
Spero, R.C., B. Smith, L. Vicci, J. Cribb, E.T. O’Brien, S.T. Lord, and R. Superfine. High Throughput Microbead Rheology of Fibrin Gels. in Biophysical Society Meeting. 2007. Baltimore, Maryland: Biophysical Journal.
Spero, R.C., B. Smith, L. Vicci, J. Cribb, E.T. O’Brien, S.T. Lord, and R. Superfine. High throughput microbead rheology of fibrin gels. Biophysical Journal. 2007: p. 521a-521a. ISI:000243972403286
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Sun, F.C., A.V. Dobrynin, D. Shirvanyants, H.I. Lee, K. Matyjaszewski, G.J. Rubinstein, M. Rubinstein, and S.S. Sheiko. Flory theorem for structurally asymmetric mixtures. Physical Review Letters. 2007. 99(13). ISI:000249786700081
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Tanase, M., N. Biais, and M. Sheetz. Magnetic tweezers in cell biology. Methods Cell Biol. 2007. 83: p. 473-93. 17613321
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Winters, S.L., C.W. Davis, and R.C. Boucher. Mechanosensitivity of mouse tracheal ciliary beat frequency: roles for Ca2+, purinergic signaling, tonicity, and viscosity. Am J Physiol Lung Cell Mol Physiol. 2007. 292(3): p. L614-24. 16963528
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Xu, K., M.G. Forest, and I. Klapper. On the correspondence between creeping flows of viscous and viscoelastic fluids. Journal of Non-Newtonian Fluid Mechanics. 2007. 145(2-3): p. 150-172. ISI:000249550100009
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2006
Asokan, S., R.L. Caroll, S. Washburn, R.E. Cheney, and R. Superfine. Fluid Flow Can Steer Motile Actin Filaments in Microfluidic Channels. Biophysical Journal. 2006.
Burns, E. and F.P. Brooks Jr. Perceptual Sensitivity to Visual/Kinesthetic Discrepancy in Hand Speed, and Why We Might Care. in VRST 2006. 2006. Simassol, Cyprus.
Burns, E., S. Razzaque, A.T. Panter, M.C. Whitton, M.R. McCallus, and F.P. Brooks Jr. The Hand Is More Easily Fooled than the Eye: Users Are More Sensitive to Visual Interpenetration than to Visual-Proprioceptive Discrepancy. Journal on Presence: Teleoperators and Virtual Environments. 2006. 15(1): p. 1-15.
Burns, E., S. Razzaque, M.C. Whitton, and F.P. Brooks. MACBETH: Manadement of Avatar Conflict by Employment of a Technique Hybrid. International Journal of Virtual Reality. 2006. 6(2): p. 11-20. Burns2006
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Cribb, J., D.B. Hill, J. Fisher, J. Sheehan, M. Rubinstein, M.G. Forest, and R. Superfine. Contrast and Comparison of the Microscopic and Macroscopic Rheological Properties of lambda-DNA and Human Airway Mucus. Biophysical Journal. 2006.
Fielding, J.R., D. Borland, K.H. Lee, J.P. Clarke, E. Wallen, R. Pruthi, and R.M. Taylor. Virtual pyeloscopy using volumetric depth peeling. Acad Radiol. 2006. 13(6): p. 759-63. 16679279
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Fisher, J.K., J. Cribb, K.V. Desai, L. Vicci, B. Wilde, K. Keller, R.M. Taylor, J. Haase, K. Bloom, E.T. O’Brien, and R. Superfine. Thin-foil magnetic force system for high-numerical-aperture microscopy. Rev Sci Instrum. 2006. 77(2): p. nihms8302. 16858495
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Fisher, J.K., L. Vicci, J. Cribb, E.T. O’Brien, R.M. Taylor, and R. Superfine. Magnetic force micromanipulation systems for the biological sciences. NANO. 2006. 1(3): p. 191-205. ISI:000203000300001
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Hall, A.R., L. An, J. Liu, L. Vicci, M.R. Falvo, R. Superfine, and S. Washburn. Experimental measurement of single-wall carbon nanotube torsional properties. Phys Rev Lett. 2006. 96(25): p. 256102. 16907325
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Jones, M.G., M.R. Falvo, B.P. Broadwell, and S. Dotger. Self-Assembly – How Nature Builds. The Science Teacher. 2006.
Klapper, I., K. Xu, and M.G. Forest. Reciprocity Relations Between Stokes Flows of Viscous and Viscoelastic Fluids. Journal of Non-Newtonian Fluid Mechanics. 2006.
Liu, W., Jawerth, L. M., Sparks, E. A ., Falvo, M. R., Hantgan, R. R., Superfine, R., Lord, S. T., Guthold, M., (2006) “Fibrin Fibers have Extraordinary Extensibility and Elasticity” Science 313, 634
Liu, W., L.M. Jawerth, E.A. Sparks, M.R. Falvo, R.R. Hantgan, R. Superfine, S.T. Lord, and M. Guthold. Fibrin fibers have extraordinary extensibility and elasticity. Science. 2006. 313(5787): p. 634. 16888133
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Martin, J., Procedural House Generation: A method for dynamically generating floor plans (Poster), in 2006 ACM Symposium on Interactive 3D Graphics and Games. 2006, ACM: Redwood City, CA.
Matsui, H., V.E. Wagner, D.B. Hill, U.E. Schwab, T.D. Rogers, B. Button, R.M. Taylor, 2nd, R. Superfine, M. Rubinstein, B.H. Iglewski, and R.C. Boucher. A physical linkage between cystic fibrosis airway surface dehydration and Pseudomonas aeruginosa biofilms. Proc Natl Acad Sci U S A. 2006. 103(48): p. 18131-6. 17116883
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Muller, P., J. Cohn, D. Schmorrow, R. Stripling, K. Stanney, L. Milham, M.C. Whitton, and J. Folks. The Fidelity Matrix: Mapping System FIdelity to Training Outcome. in Proceedings of IITSEC 2007. 2006.
Peng, L., B.J. Stephens, K. Bonin, R. Cubicciotti, and M. Guthold. A Combined Atomic Force/Fluorescence Microscopy Technique to Select Aptamers in a Single Cycle from a Small Pool of Random Oligonucleotides. Microscopy Research and Technique. 2006.
Prakash, R., R. Superfine, S. Washburn, and M.R. Falvo. Functionalization of Carbon Nanotubes with Proteins and Quantum Dots in Aqueous Buffer Solutions. Applied Physics Letters. 2006. 88(063102).
Randell, S.H. and R.C. Boucher. Effective mucus clearance is essential for respiratory health. Am J Respir Cell Mol Biol. 2006. 35(1): p. 20-8. 16528010
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Skinner, K., C. Dwyer, and S. Washburn. Selective functionalization of arbitrary nanowires. Nano Lett. 2006. 6(12): p. 2758-62. 17163701
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Sonnenwald, D.H., M.C. Whitton, and K. Maglaughlin, Evaluation of a scientific collaboratory sytstem: Investigating a collaboratory’s potential before deployment, in Science on the Internet, A.Z.N.B. G. Olson, Editor. 2006, MIT Press: Boston.
Sul, O.J., M.R. Falvo, R.M. Taylor II, S. Washburn, and R. Superfine. Thermally Actuated Untethered Impact-Driven Locomotive Micro-Devices. Appl. Phys. Lett.. 2006. 89(20): p. 203512.
Wen, Q., C. Healey, M.C. Whitton, and R.M. Taylor II. A Comparison of User Performance in an Immersive HMD, a fish tank with Haptic Displays for Visualization of Volumetric Data. Proceedings of Applied Perception in Graphics and Visualization 2006. 2006: p. 8 pages.
2005
Borland, D., J. Clarke, and R.M. Taylor II. Volumetric Depth Peeling for Virtual Arthroscopy. SPIE International Technical Group Newsletter. 2005. 16(2): p. 1.
Burns, E., S. Razzaque, A.T. Panter, M.C. Whitton, M.R. McCallus, and F.P. Brooks Jr. The Hand is Slower than the Eye: A quantitative exploration of visual dominance over proprioception. in Proceedings of IEEE Virtual Reality 2005. Honorable Mention in Best Paper Competition. 2005: IEEE Computer Society.
Burns, E., S. Razzaque, M.C. Whitton, M.R. McCallus, A.T. Panter, and F.P. Brooks Jr. The Hand is More Easily Fooled than the Eye: Users are more sensitive to visual interpenetration than to visual-proprioceptive discrepancy. Presence: Teleoperators and Virtual Environments. 2005.
Cribb, J., D.B. Hill, R.M. Taylor, L. Vicci, J. Fisher, K.V. Desai, B. Wilde, J. Sheehan, M.G. Forest, and R. Superfine. Measuring local microrheological properties of human mucus with magnetically driven microbeads. Biophysical Journal. 2005. 88(1): p. 505a-505a. ISI:000226378502462
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Fisher, J.K., J.R. Cummings, K.V. Desai, L. Vicci, B. Wilde, K. Keller, C. Weigle, G. Bishop, R.M. Taylor, C.W. Davis, R.C. Boucher, E.T. O’Brien, and R. Superfine. Three-dimensional force microscope: A nanometric optical tracking and magnetic manipulation system for the biomedical sciences. Review of Scientific Instruments. 2005. 76(5). ISI:000229064300037
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Hill, D.B., J. Cribb, H. Matsui, and R. Superfine. Oscillations in mucus flow. Biophysical Journal. 2005. 88(1): p. 505a-505a. ISI:000226378502463
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Hollins, M., F. Lorenz, A. Seeger, and R. Taylor. Factors contributing to the integration of textural qualities: evidence from virtual surfaces. Somatosens Mot Res. 2005. 22(3): p. 193-206. 16338827
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Kohli, L., E. Burns, D. Miller, and H. Fuchs. Combining Passive Haptics with Redirected Walking. in the International Conference of Artificial Reality and Telexistence (ICAT) 2005. 2005. Christchurch, New Zealand.
Kohli, L. and M.C. Whitton. The Haptic Hand: Providing User Interface Feedback with the Non-Dominant Hand in Virtual Environments. in Proceedings of Graphics Interface 2005. 2005.
Marshburn, D., C. Weigle, B.G. Wilde, K. Desai, J.K. Fisher, J. Cribb, E.T. O’Brien, R. Superfine, and R.M.T. II. The Software Interface to the 3D-Force Microscope. Proceedings of IEEE Visualization. 2005: p. 455-462.
Meehan, M., S. Razzaque, B. Insko, M. Whitton, and F.P. Brooks, Jr. Review of four studies on the use of physiological reaction as a measure of presence in stressful virtual environments. Appl Psychophysiol Biofeedback. 2005. 30(3): p. 239-58. 16167189
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Peng, L., R. Cubicciotti, and M. Guthold. Novel, Single-Molecule Methodology to Identify New Aptamers. Biophysical Journal. 2005. 88(1): p. 65A Part 2 Suppl S.
Stadermann, M., S.J. Papadakis, M.R. Falvo, Q. Fu, J. Liu, Y. Fridman, J.J. Borland, R. Superfine, and S. Washburn. Exponential decay of local conductance in single-wall carbon nanotubes. Phys. Rev. B.. 2005. 72(24): p. 245406.
Whitton, M.C., J. Cohn, J. Feasel, P. Zimmons, S. Razzaque, J. Poulton, B. McLeod, and F.P. Brooks Jr. Comparing VE Locomotion Interfaces. in Proceedings of IEEE Virtual Reality 2005. 2005. Bonn, Germany: IEEE Computer Society.
Whitton, M.C., J. Cohn, J. Feasel, P. Zimmons, S. Razzaque, S. Poulton, B. McLeod, and F.P. Brooks. Comparing VE Locomotion Interfaces. in Proceedings of IEEE Virtual Reality 2005. 2005.
2004
Cohn, M.C. Whitton, W. Becker, and F.P. Brooks, Information Presentation and Control Method Impact Performance on a Complex Virtual Locomotion Task (Abstract), in Human Factors and Ergonomics Society. 2004: New Orleans, LO.
Dwyer, C., R.M. Taylor II, L. Vicci, and J. Poulton. Parallel Computer Architectures Enabled by Self-Assembly. Proceedings of the 1st Conference on the Foundations of Nanoscience. 2004. 379.
Dwyer, C., L. Vicci, J. Poulton, D. Erie, R. Superfine , S. Washburn, and R.M. Taylor II. The Design of DNA Self-Assembled Computing Circuitry. IEEE Trans. on VLSI. 2004. 12: p. 1214-20.
Dwyer, C., L. Vicci, J. Poulton, and R.M. Taylor II. DNA Self-assembled Parallel Computer Architectures. Nanotechnology. 2004. 15: p. 1688-94.
Guthold, M., Liu, W., Stephens, B. J., Lord, S. T., Hantgan, R. R., Erie, D. A., Taylor, R. M., Superfine, R. (2004) “Visualization and Mechanical Manipulations of Individual Fibrin Fibers Suggest that Fiber Cross-Section has Fractal Dimension 1.3” Biophys. J. 87, 4226-36
Guthold, M., W. Liu, B. Stephens, S.T. Lord, R.R. Hantgan, D.A. Erie, R.M. Taylor, Jr., and R. Superfine. Visualization and mechanical manipulations of individual fibrin fibers suggest that fiber cross section has fractal dimension 1.3. Biophys J. 2004. 87(6): p. 4226-36. 15465869
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Hollins, M., A. Seeger, G. Pelli, and R. Taylor. Haptic perception of virtual surfaces: scaling subjective qualities and interstimulus differences. Perception. 2004. 33(8): p. 1001-19. 15521697
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Hudson, T., M.C. Whitton, A. Helser, and D.H. Sonnenwald. Managing collaboration in the nanoManipulator. Presence. 2004. 13(2).
Jen, D., P. Parente, J. Robbins, C. Weigle, R.M. Taylor II, A. Burette, and R. Weinberg. ImageSurfer: A Tool for Visualizing Correlations between Two Volume Scalar Fields. in IEEE Visualization 2004 Proceedings. 2004. Austin, TX.
Jones, G., T. Tretter, A. Bokinski, and A. Negishi. Haptic technology and learning. Haptics-e. 2004.
Jones, M.G., T. Andre, D. Kubasko, A. Bokinski, T. Tretter, A. Negishi, R.M. Taylor II, and R. Superfine Hands-on Investigations with Microscopic Organisms. Science Education. 2004.
Jones, M.G., T. Andre, D. Kubasko, A. Bokinski, T. Tretter, A. Negishi, R.M. Taylor II, and R. Superfine Remote Atomic Force Microscopy of Microscopic Organisms: Technological Innovations for Hands-On Science with Middle and High School Students. Science Education. 2004. 88: p. 55-71.
Jones, M.G., J. Minogue, T. Tretter, A. Negishi, and R.M. Taylor II. Haptic augmentation of science instruction: Does touch matter? Science Education. 2004.
Jones, M.G., T. Tretter, M. Paechter, D. Kubasko, and A. Bokinski. Spectator or participant? African-American students’ writing about science. Science Education. 2004.
Labbe, J.C., E.K. McCarthy, and B. Goldstein. The forces that position a mitotic spindle asymmetrically are tethered until after the time of spindle assembly. J Cell Biol. 2004. 167(2): p. 245-56. 15492042
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Lok, B., S. Naik, M.C. Whitton, and F.P. Brooks Jr. Effects of Handling Real Objects and Self-Avatar Fidelity on Cognitive Task Performance and Sense of Presence in Virtual Environments. Journal on Presence: Teleoperators and Virtual Environments. 2004. 12(6): p. 615-628.
Matthews, W.G., A. Negishi, D.M. McCarty, R.J. Samulski, R.M. Taylor II, and R. Superfine Controlled manipulation of macromolecular assemblies and microspheres over surfaces – Demonstration of rolling on the nanometer length scale. Langmuir. 2004.
Negishi, A., J. Chen, D.M. McCarty, R.J. Samulski, J. Liu, and R. Superfine. Analysis of the interaction between adeno-associated virus and heparan sulfate using atomic force microscopy. Glycobiology. 2004. 14(11): p. 969-77. 15215232
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Paechter, M., M.G. Jones, T. Tretter, A. Bokinski, D. Kubasko, A. Negishi, and T. Andre. Hands-on science education: Designing instruction that is appealing to female and male students. 2004.
Painter, J., M.G. Jones, D. Kubasko, T. Tretter, A. Negishi, and T. Andre. Pulling back the curtain: Scientists in the classroom. School Science and Mathematics. 2004.
Papadakis, S.J., A.R. Hall, P.A. Williams, L. Vicci, M.R. Falvo, R. Superfine , and S. Washburn. Resonant Oscillators with Carbon-Nanotube Torsion Springs. Physical Review Letters. 2004. 93: p. 146101.
Stadermann, M., S.J. Papadakis, M.R. Falvo, J. Novak, E. Snow, Q. Fu, J. Liu, Y. Fridman, J.J. Boland, R. Superfine , and S. Washburn. Nanoscale study of conduction through carbon nanotube networks. Physical Review B. 2004. 69(20): p. 201402.
Sul, O., S.J. Papadakis, M.R. Falvo, Y. Fridman, R.M. Taylor II, R. Superfine , and S. Washburn. Bimorph actuators based on carbon nanotubes: Thermal bending of metal-nanotube cantilevers. Appl. Phys. Lett.. 2004.
Taylor II, R.M., D. Borland, F.P. Brooks Jr., M. Falvo, M. Guthold, T. Hudson, K. Jeffay, G. Jones, D. Marshburn, S.J. Papadakis, L.-C. Qin, A. Seeger, F.D. Smith, D.H. Sonnenwald, R. Superfine , S. Washburn, C. Weigle, M.C. Whitton, P. Williams, L. Vicci, and W. Robinett, Visualization and Natural Control Systems for Microscopy, in Visualization Handbook, C.J.a.C. Hansen, Editor. 2004, Harcourt Academic Press. p. 875-900.
2003
Asokan, S.B., L.M. Jawerth, R.L. Carroll, R.E. Cheney, S. Washburn, and R. Superfine Two-Dimensional Manipulation and Orientation of Actin-Myosin Systems with Dielectrophoresis. Nano Letters. 2003. 3(4): p. 431-437.
Bokinsky, A. Data Driven Spots: A Layered Visualization Technique for the Interactive Display of Multiple 2D Scalar Variables, in Computer Science 2003, University of North Carolina: Chapel Hill
Brooks Jr., F.P., Foreword, in Level of Detail for 3D Graphics, D. Luebke, et al., Editors. 2003, Morgan Kaufmann Publishers: San Francisco, CA. p. ix.
Brooks Jr., F.P. Incorporating Dynamic Real Objects into Immersive Virtual Environments. in ACM SIGGRAPH. 2003. San Diego, CA: ACM Transactions on Graphics.
Carter, G., M.G. Jones, and M. Rua. The Effects of Partner’s Ability on the Achievement and Conceptual Organization of High Achieving Fifth Grade Students. Science Education. 2003. 87(1): p. 94-111.
Christiansen, N. and K.L. Maglaughlin. Crossing from physical workplace to virtual workspace: be aware. in International Conference on Human Computer Interaction. 2003.
Dwyer, C., R.M. Taylor II, and L. Vicci. Performance Simulation of Nanoscale Silicon Rod Field-Effect Transistor Logic. IEEE Trans. on Nanotechnology. 2003. 2(2): p. 69-74.
Hall, A., G. Matthews, R. Superfine , M. Falvo, and S. Washburn. Simple and Efficient Method for Carbon Nanotube Attachment to Scanning Probes and Other Substrates. Appl. Phys. Lett.. 2003. 82(15): p. 2506-2508.
Hudson, T., A. Helser, D.H. Sonnenwald, and M.C. Whitton. Managing Collaboration in the Distributed nanoManipulator. in IEEE Virtual Reality 2003. 2003. Los Angeles, CA: IEEE Press.
Hudson, T. Adapting Interactive Applications for Distributed Environments, in Computer Science 2003, UNC-CH: Chapel Hill
Jones, G., A. Bokinski, T. Tretter, A. Negishi, D. Kubasko, R. Superfine , and R.M. Taylor II, Atomic force microscopy with touch: Educational applications, in Science, Technology and Education of Microscopy: an Overview, A. Mendez-Vilas, Editor. 2003, Formatex: Madrid, Spain.
Jones, G., T. Andre, R. Superfine , and R.M. Taylor II. Learning at the Nanoscale: The Impact of Students’ Use of Remote Microscopy on Concepts of Viruses, Scale, and Microscopy. Journal of Research in Science Teaching. 2003. 40(3): p. 303-322.
Jones, M.G., T. Hargrove, and B. Jones. The Failed Metaphors of Teaching. The School Administrator. 2003. 60(11): p. 26-28.
Lok, B., Evaluation and Application of Algorithms for a Hybrid Environment System, in Visualization and Mechanical Manipulations of Individual Fibrin Fibers, B. Thompson, Editor. 2003, University of Rochester Press: New York. p. 149-175.
Lok, B., S. Naik, M.C. Whitton, and F.P. Brooks Jr. Effects of Handling Real Objects and Avatar Fidelity on Cognitive Task Performance in Virtual Environments. in IEEE Virtual Reality 2003. 2003. Los Angeles, CA.
Maglaughlin, K.L. An exploration of interdisciplinary academic scientific collaboration factors., in School of Information and Library Science 2003, University of North Carolina at Chapel Hill:
Meehan, M., S. Razzaque, M.C. Whitton, and F.P. Brooks Jr. Effect of Latency on Presence in Stressful Virtual Environments. in IEEE Virtual Reality 2003. 2003. Los Angeles, CA.
Papadakis, S.J., P.A. Williams, O. Sul, M.R. Falvo, R. Superfine , and S. Washburn. Mechanics of Nanotubes and Nanotube-based Devices. in International Winterschool on Electronic Properties of Novel Materials. 2003. Kirchberg, Austria.
Prakash, R., S. Washburn, R. Superfine , R.E. Cheney, and M. Falvo. Visualization of individual carbon nanotubes with fluorescence microscopy using conventional fluorophores. Appl. Phys. Lett.. 2003. 83: p. 1219-1221.
Seeger, A., C. Fretzagias, and R. Taylor, 2nd. Software acceleration techniques for the simulation of scanning electron microscope images. Scanning. 2003. 25(5): p. 264-73. 14748390
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Sonnenwald, D.H. Expectations for a scientific collaboratory: A case study. in ACM GROUP 2003 Conference. 2003. NY: ACM Press.
Sonnenwald, D.H. and B. Li. Scientific collaboratories in higher education: Exploring learning style preferences and perceptions of technology. British Journal of Educational Technology. 2003. 43(3): p. 419-431.
Sonnenwald, D.H., K.L. Maglaughlin, and M.C. Whitton. Designing to support situation awareness across distances: An example from a scientific collaboratory. Information Processing & Management. 2003.
Sonnenwald, D.H., M.C. Whitton, and K.L. Maglaughlin. Evaluating a scientific collaboratory: Results of a controlled experiment. ACM Transactions on Computer Human Interaction. 2003. 10(2): p. 150-176.
Sonnenwald, D.H., M.C. Whitton, and K.L. Maglaughlin. Scientific collaboratories: Evaluating their potential. ACM Interactions. 2003. 19(4): p. 9-10.
Stadermann, M. Buckling Nanotube with Conductivity Map (Visualization Challenge). Science. 2003. 301: p. 1473.
Stadermann, M., H. Grube, J. Boland, S.J. Papadakis, M.R. Falvo, R. Superfine , and S. Washburn. Simultaneous Atomic Force Microscopy Measurement of Topography and Contact Resistance of Metal Films and Carbon Nanotubes. Review of Scientific Instruments. 2003. 74(8): p. 3653-3655.
Stilwell, J.L., D.M. McCarty, A. Negishi, R. Superfine, and R.J. Samulski. Development and characterization of novel empty adenovirus capsids and their impact on cellular gene expression. J Virol. 2003. 77(23): p. 12881-5. 14610209
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Sul, O., S.J. Papadakis, M. Falvo, Y. Fridman, R.M. Taylor II, S. Washburn, and R. Superfine Bimorph actuators based on carbon nanotubes: Thermal bending of metal-nanotube cantilevers. Appl. Phys. Lett.. 2003.
Taylor II, R.M., C. Ware, and V. Interrante. Perceptually-Based Visualization Design. in Course notes for SIGGRAPH 2003 course #45, Full-day course on visualization organized by R.M. Taylor II. 2003. San Diego, CA.
Tretter, T. and G. Jones. A Sense of Scale: Studying how scale effects systems and organisms. Science Teacher. 2003. 70(1): p. 22-25.
Tretter, T. and M.G. Jones. Relationships between inquiry-based teaching and physical science standardized test scores. School Science and Mathematics. 2003. 103(7): p. 345-350.
Wang, H., Y. Yang, M.J. Schofield, C. Du, Y. Fridman, S.D. Lee, E.D. Larson, J.T. Drummond, E. Alani, P. Hsieh, and D.A. Erie. DNA bending and unbending by MutS govern mismatch recognition and specificity. Proc Natl Acad Sci U S A. 2003. 100(25): p. 14822-7. 14634210
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Whitton, M.C. Making Virtual Environments Compelling. Communications of the ACM. 2003.
Williams, P., S.J. Papadakis, A. Patel, M. Falvo, S. Washburn, and R. Superfine Fabrication of Nanometer-scale Mechanical Devices Incorporating Individual Multiwalled Carbon Nanotubes as Torsional Springs. Appl. Phys. Lett.. 2003. 82: p. 805.
Zhang, J., G.L. Wang, Y.S. Shon, O. Zhou, R. Superfine , and R. Murray. Interactions of small Molecules and Au Nanoparticles with Solubilized Single-Wall Carbon Nanotubes. Journal of Physical Chemistry B. 2003. 107(16): p. 3726-3732.
Zimmons, P. The Influence of Lighting Quality on Presence and Task Performance in Virtual Environments, in Computer Science 2003, UNC-CH: Chapel Hill p.244
2002
Brooks Jr., F.P., The History of IBM Operating System / 360, in Software Pioneers: Contributions to Software Engineering, M. Broy and E. Denert, Editors. 2002, Springer: Berlin. p. 170-178.
Dwyer, C., R. Taylor, and L. Vicci. Transport Simulation of a Nanoscale Silicon Rod Field-Effect Transistor. in IEEE 2nd Conference on Nanotechnology. 2002. Arlington, VA.
Dwyer, C., M. Guthold, M. Falvo, S. Washburn, R. Superfine, and D. Erie. DNA-functionalized single-walled carbon nanotubes. Nanotechnology. 2002. 13: p. 601-4.
Dwyer, C., R. Taylor, and L. Vicci. Mixed-Mode Simulation of Nanoscale Silicon Rod Field-Effect Transistor Logic. IEEE Trans. on Nanotechnology. 2002.
Harris, M.J., G. Coombe, T. Scheuermann, and A. Lastra. Physically-Based Visual Simulation on Graphics Hardware. in 2002 SIGGRAPH / Eurographics Workshop on Graphics Hardware. 2002. Saarbruecken, Germany.
Jones, M.G., T. Andre, D. Kubasko, A. Bokinsky, T. Tretter, A. Negishi, R. Taylor, and R. Superfine. Hands-on Investigations with Microscopic Organisms. Science Education. 2002.
Lok, B.C.L. Interacting With Dynamic Real Objects in Virtual Environments, in Computer Science 2002, University of North Carolina: Chapel Hill p.172
Maglaughlin, K.L. and D.H. Sonnenwald. User perspectives on relevance criteria: A comparison among relevant, partially relevant and not relevant judgments. Journal of the American Society of Information and Technology. 2002. 53(5): p. 327-342.
Meehan, M., B. Insko, M. Whitton, and F.P. Brooks Jr. Physiological Measures of Presence in Stressful Virtual Environments. ACM Transactions on Graphics. 2002. 21(3): p. 645-652.
Mortensen, J., V. Vinayagamoorthy, M. Slater, A. Steed, B. Lok, and M.C. Whitton. Collaboration in Tele-Immersive Environments. in Eighth Eurographics Workshop on Virtual Environments. 2002. Barcelona, Spain: ACM – The Eurographics Association.
Razzaque, S., D. Swapp, M. Slater, M.C. Whitton, and A. Steed. Redirected Walking in Place. in Eighth Eurographics Workshop on Virtual Environments. 2002. Barcelona, Spain: ACM – The Eurographics Association.
Sonnenwald, D.H., M.C. Whitton, and K.L. Maglaughlin. Scientific collaboratories. ASIS&T Bulletin. 2002. 28(6).
Superfine, R., M. Falvo, R.M. Taylor II, and S. Washburn, Nanomanipulation: Buckling, Transport and Rolling at the Nanoscale, in CRC Handbook of Nanoscience, Engineering, and Technology, S. Lyshevski, et al., Editors. 2002, CRC Press LLC: Boca Raton.
Superfine, R., G. Bishop, J. Cummings, J. Fisher, K. Keller, G. Matthews, D. Sill, R.M. Taylor II, L. Vicci, C. Weigle, G. Welch, and B. Wilde. Touching In Biological Systems: A 3D Force Microscope. in Microscopy and Microanalysis 2002. 2002. Quebec City, Canada.
Taylor II, R.M. Visualizing Multiple Fields on the Same Surface. IEEE Computer Graphics and Applications. 2002(Mar-Apr): p. 6-10.
Varadhan, G., W. Robinett, D. Erie, and R.M. Taylor II. Fast Simulation of Atomic-Force-Microscope Imaging of Atomic and Polygonal Surfaces Using Graphics Hardware. in SPIE Conference on Visualization and Data Analysis. 2002. San Jose Convention Center, San Jose, CA.
Washburn, S. and S.J. Papadakis. Transport across atomically aligned interfaces: Fingertip manipulation and electrical probing of nanotubes. in International Workshop on Electron Interference and Decoherence in Nanostructures. 2002. Max Planck Institute for Physics of Complex Systems.
Williams, P.A., S.J. Papadakis, M.R. Falvo, A.M. Patel, M. Sinclair, A. Seeger, A. Helser, R.M. Taylor II, S. Washburn, and R. Superfine. Controlled placement of an individual carbon nanotube onto a microelectromechanical structure. Applied Physics Letters. 2002. 80(14): p. 2574-2576.
Williams, P.A., S.J. Papadakis, A.M. Patel, M.R. Falvo, S. Washburn, and R. Superfine. Torsional response and stiffening of individual multiwalled carbon nanotubes. Phys Rev Lett. 2002. 89(25): p. 255502. 12484895
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2001
Brooks Jr., F.P. The History of IBM Operating System/360. in SD&M Software Pioneers Conference. 2001. Bonn, Germany.
Guthold, M. and D.A. Erie. Single-molecule study reveals a complex E. coli RNA polymerase. Chembiochem. 2001. 2(3): p. 167-70. 11828441
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Guthold, M., R. Superfine, and R.M. Taylor II. The rules are changing: Force measurements on single molecules and how they relate to bulk reaction kinetics and energies. Biomedical Microdevices. 2001. 3(1): p. 9-18.
Harris, M. and A. Lastra. Real-Time Cloud Rendering. Computer Graphics Forum. 2001. 20(3): p. 76-84.
Hudson, T.C., M.C. Weigle, K. Jeffay, and R.M. Taylor II. Experiments in Best-Effort Multimedia Networking for a Distributed Virtual Environment. Proceedings of Multimedia Computing and Networking. 2001(January): p. 88-98.
Insko, B. Passive Haptics Significantly Enhances Virtual Environments, in Computer Science 2001, University of North Carolina: Chapel Hill
Jeffay, K., T. Hudson, and M. Parris. Beyond Audio and Video: Multimedia Networking Support for Distributed, Immersive Virtual Environment. in 27th EUROMICRO Conference. 2001. Warsaw, Poland.
Lindholm, E., M.J. Kligard, and H. Moreton. A user-programmable vertex engine. in International Conference on Computer Graphics and Interactive Techniques. 2001: ACM Press.
Lok, B. Online Model Reconstruction for Interactive Virtual Environments. in ACM Symposium on Interactive 3D Graphics. 2001.
Meehan, M., B. Insko, M.C. Whitton, and F.P. Brooks. Physiological Measures of Presence in Virtual Environments. in 4th International Workshop on Presence. 2001. Philadelphia.
Meehan, M. Physiological Reaction as an Objective Measure of Presence in Virtual Environments, in Computer Science 2001, University of North Carolina: Chapel Hill p.142
Razzaque, S., Z. Kohn, and M.C. Whitton. Redirected Walking. in Eurographics 2001. 2001.
Seeger, A., S. Paulson, M. Falvo, A. Helser, R.M. Taylor, R. Superfine, and S. Washburn. How does it feel to roll a molecule? in 45th International Conference on Electron, Ion and Photon Beam Technology and Nanofabrication. 2001.
Seeger, A., S. Paulson, M. Falvo, A. Helser, R.M. Taylor II, R. Superfine, and S. Washburn. Hands-on tools for nanotechnology. Journal of Vacuum Science & Technology. 2001. B 19: p. 2717-2722.
Sonnenwald, D.H., R. E. Bergquist, K. L. Maglaughlin, E. Kupstas-Soo, and M.C. Whitton, Designing to support colaborative scientific research across distances: The nanoManipulator environment, in Collaborative Virtual Environments, E. Churchill, D. Snowdon, and A. Munro, Editors. 2001, Springer Verlag: London. p. 202-224.
Sonnenwald, D.H., K.L. Maglaughlin, and M.C. Whitton. Using Innovation Diffusion Theory to Guide Collaboration Technology Evaluation: Work in Progress. in IEEE 10th International Workshop on Enabling Technologies for Collaborative Enterprises (WETICE). 2001. NY: IEEE Press.
Taylor II, R.M., T.C. Hudson, A. Seeger, H. Weber, J. Juliano, and A.T. Helser. VRPN: A Device-Independent, Network-Transparent VR Peripheral System. in ACM Symposium on Virtual Reality Software & Technology 2001. 2001. Banff Centre, Canada.
2000
Arthur, K. Effects of Field of View on Performance with Head-Mounted Displays, in Computer Science 2000, University of North Carolina: Chapel Hill
Brooks Jr., F.P. The Design of Design. in Turing Award address at SIGGRAPH ’00. 2000: Communications of the ACM.
Christiansen, M., K. Jeffay, D. Ott, and F.D. Smith. Tuning RED for Web Traffic. in ACM SIGCOMM. 2000. Stockholm, Sweden.
Falvo, M.R., J. Steele, R.M.T. II, and R. Superfine. Gearlike rolling motion mediated by commensurate contact: Carbon nanotubes on HOPG. Phys. Rev. B. 2000. 62(October 15): p. 10665-10667.
Falvo, M.R., J. Steele, R.M.T. II, and R. Superfine. Evidence of commensurate contact and rolling motion: AFM manipulation studies of carbon nanotubes on HOPG. Tribology Letters. 2000. 9: p. 73-76.
Falvo, M.R. and R. Superfine. Mechanics and friction at the nanometer scale. Journal of Nanoparticle Research. 2000. 2: p. 237-248.
Gregory, A., M.C. Lin, S. Gottschalk, and R.M.T. II. Real-Time Collision Detection for Haptic Interaction Using a 3-DoF Force Feedback Device. Computational Geometry: Theory and Applications (Special Issue on Virtual Environments). 2000. 15(1-3): p. 69-89.
Guthold, M., M.R. Falvo, W.G. Matthews, S. Paulson, S. Washburn, D. Erie, R. Superfine, F.P. Brooks, and R.M. Taylor. Controlled Manipulation of Molecular Samples with the nanoManipulator. IEEE/ASME Transactions on Mechatronics. 2000. 5(2): p. 189-198.
Guthold, M., J. Mullin, S. Lord, D. Erie, R. Superfine, and R. Taylor. Controlled Manipulation of Individual Fibrin Molecules. Biophys. J.. 2000. 78: p. A53.
Paulson, S., A. Helser, M.B. Nardelli, R.M.T. II, M. Falvo, R. Superfine, and S. Washburn. Tunable resistance of a carbon nanotube-graphite interface. Science. 2000. 290(December): p. 1742-1744.
Rivetti, C., M. Guthold, and C. Bustamante, DNA wrapping in E. coli RNA polymerase open promoter complexes revealed by scanning force microscopy, in Protein-DNA interactions: A Practical Approach, A. Travers and M. Buckle, Editors. 2000, Oxford University Press: Oxford.
Seeger, A., A. Henderson, G.L. Pelli, M. Hollins, and R.M.T. II. Haptic Display of Multiple Scalar Fields on a Surface. in Workshop on New Paradigms in Information Visualization and Manipulation. 2000. Washington, D.C.: ACM Press.
Sincell, M. NanoManipulator Lets Chemists Go Mano a Mano with Molecules. Science. 2000. 290(November 24): p. 1530.
Superfine , R., G. Jones, and R.M. Taylor II. Touching Viruses in a Networked Microscopy Outreach Project. in Conference on K-12 Outreach From University Science Departments. 2000. North Carolina State University: Science House.
Taylor II, R.M. Practical Scientific Visualization Examples. Computer Graphics. 2000. 34(1): p. 74-79 and cover.
Weigle, C., W.G. Emigh, G. Liu, R.M. Taylor, J.T. Enns, and C.G. Healey. Oriented texture slivers: A technique for local value estimation of multiple scalar fields. in Graphics Interface. 2000. Montreal, Canada.
1999
Bastos, R., K. Hoff, W. Wynn, and A. Lastra. Increased Photorealism for Interactive Architectural Walkthroughs. in Proceedings of the 1999 Symposium on Interactive 3D Graphics. 1999.
Brooks Jr., F.P. What’s Real About Virtual Reality? IEEE Computer Graphics and Applications. 1999. 19 (6)(Nov/Dec): p. 16-27.
Bustamante, C., M. Guthold, X. Zhu, and G. Yang. Facilitated target location on DNA by individual Escherichia coli RNA polymerase molecules observed with the scanning force microscope operating in liquid. J Biol Chem. 1999. 274(24): p. 16665-8. 10358002
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Clark, M. and K. Jeffay. Application-Level Measurements of Performance on the vBNS. in IEEE International Conference on Multimedia Computing and Systems. 1999. Florence, Italy.
Falvo, M.R., G. Clary, A. Helser, S. Paulson, R.M. Taylor II, V. Chi, F.P. Brooks Jr., S. Washburn, and R. Superfine. Nanomanipulation experiments exploring frictional and mechanical properties of carbon nanotubes. Microscopy and Microanalysis. 1999. 4: p. 504-512.
Falvo, M.R., R.M. Taylor, 2nd, A. Helser, V. Chi, F.P. Brooks, Jr., S. Washburn, and R. Superfine. Nanometre-scale rolling and sliding of carbon nanotubes. Nature. 1999. 397(6716): p. 236-8. 9930698
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Gregory, A., M.C. Lin, S. Gottschalk, and R. Taylor. H-COLLIDE: A Framework for Fast and Accurate Collision Detection for Haptic Interaction. in Proceedings of VR ’99. 1999. Houston, Texas.
Guthold, M., M. Falvo, W.G. Matthews, S. Paulson, J. Mullin, S. Lord, D. Erie, S. Washburn, R. Superfine, F.P. Brooks, Jr., and R.M. Taylor, 2nd. Investigation and modification of molecular structures with the nanoManipulator. J Mol Graph Model. 1999. 17(3-4): p. 187-97. 10736776
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Guthold, M., M.R. Falvo, W.G. Matthews, S. Paulson, S. Washburn, D. Erie, R. Superfine, J. F. P. Brooks, and R.M.T. II. Controlled Manipulation of Molecular Samples with the nanoManipulator. 1999.
Guthold, M., G. Matthews, A. Negishi, R.M. Taylor II, D. Erie, F.P. Brooks Jr., and R. Superfine. Quantitative Manipulation of DNA and Viruses with the nanoManipulator Scanning Force Microscope. Surf. Interf. Analysis. 1999. 27: p. 437-443.
Guthold, M., X. Zhu, C. Rivetti, G. Yang, N.H. Thomson, S. Kasas, H.G. Hansma, B. Smith, P.K. Hansma, and C. Bustamante. Direct observation of one-dimensional diffusion and transcription by Escherichia coli RNA polymerase. Biophys J. 1999. 77(4): p. 2284-94. 10512846
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Jeffay, K. Towards a Better-Than-Best-Effort Forwarding Service for Multimedia Flows. IEEE Multimedia. 1999. 6(4 (October-December)): p. 84-88.
Jones, G.M., R. Superfine, and R.M.T. II. Virtual Viruses. Science Teacher. 1999. 66(7): p. 48-50.
Matthews, W.G., A. Negishi, A. Seeger, R. Taylor, D.M. McCarty, R.J. Samulski, and R. Superfine. Elasticity and binding of adenovirus in air and in liquid. Biophysical Society 43rd annual meeting, Feb. 13-17, 1999, Baltimore, MD; Biophys. J.. 1999. A27.
Negishi, A., W.G. Matthews, D.M. McCarty, R.J. Samulski, D. Rohrer, A. Henderson, R. Taylor, and R. Superfine. Probing the structural properties of adenovirus using the atomic force microscope. Biophysical Society 43rd annual meeting, Feb. 13-17, 1999, Baltimore, MD; Biophys. J.. 1999. 76: p. A27.
Paulson, S., M.R. Falvo, N. Snider, A. Helser, T. Hudson, A. Seeger, R.M. Taylor, R. Superfine, and S. Washburn. In Situ Resistance Measurements of Strained Carbon Nanotubes. Applied Physics Letters. 1999. 75(19): p. 2936-2938.
Rivetti, C., M. Guthold, and C. Bustamante. Wrapping of DNA around the E.coli RNA polymerase open promoter complex. Embo J. 1999. 18(16): p. 4464-75. 10449412
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Sonnenwald, D.H., E. Kupstas Soo, and R. Superfine A Multi-Dimensional Evaluation of the nanoManipulator, a Scientific Collaboration System. ACM SIGGROUP Bulletin. 1999. 20(2): p. 46-50.
Taylor II, R.M. and R. Superfine, Advanced Interfaces to Scanned-Probe Microscopes, in Handbook of Nanostructured Materials and Nanotechnology, H.S. Nalwa, Editor. 1999, Academic Press: New York. p. 271-308.
Taylor II, R.M. Scientific Applications of Force Feedback: Molecular Simulation and Microscope Control. in SIGGRAPH ’99. 1999. Los Angeles, CA.
Usoh, M., K. Arthur, M.C. Whitton, R. Bastos, A. Steed, M. Slater, and F.P. Brooks. Walking > walking-in-place > flying in virtual environments. in Proc. of SIGGRAPH ’99, Computer Graphics Proceedings, Annual Conference Series. 1999.
1998
Arthur, K., T. Preston, R. Taylor, F.P.B. Jr., M.C. Whitton, and W.V. Wright. The PIT: Design, Implementation, and Next Steps. in 2nd International Immersive Projection Technology Workshop. 1998. Ames, Iowa.
Grant, B., A. Helser, and R.M. Taylor II. Adding Force Display to a Stereoscopic Head-Tracked Projection Display. in VRAIS ’98. 1998. Atlanta, GA.
Ratcliff, G.C., D.A. Erie, and R. Superfine. Photothermal oscillation for oscillating mode atomic force microscopy in solution. Appl. Phys. Lett.. 1998. 72(15): p. 1911-1913.
Robinett, W. Switching Among the Four Modes of a Teleoperator System: Teleoperation, Simulation, Replay and Robot. in International Conference on Artificial Reality and Tele-existence. 1998. Tokyo, Japan.
Taylor II, R.M. Molecular Simulation and Microscope Control Applications of Force Feedback. in Course notes for SIGGRAPH ’98 Course #1, “Physical Interaction: The Nuts and Bolts of Using Touch Interfaces”. 1998.
Taylor II, R.M. Network Access to a PHANToM Through VRPN. in PHANToM User’s Group Workshop. 1998. Dedham, MA.
1997
Chen, J., C. DiMattia, M. Falvo, P. Thiansathaporn, R. Superfine, and R.M.T. II. Sticking to the Point: A Friction and Adhesion Model for Simulated Surfaces. in Proceedings of the Sixth Annual Symposium on Haptic Interfaces for Virtual Environment and Teleoperator Systems. 1997. Dallas, Texas.
Falvo, M.R., G.J. Clary, R.M. Taylor, 2nd, V. Chi, F.P. Brooks, Jr., S. Washburn, and R. Superfine. Bending and buckling of carbon nanotubes under large strain. Nature. 1997. 389(6651): p. 582-4. 9335495
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Falvo, M.R., S. Washburn, R. Superfine, M. Finch, F.P. Brooks, Jr., V. Chi, and R.M. Taylor, 2nd. Manipulation of individual viruses: friction and mechanical properties. Biophys J. 1997. 72(3): p. 1396-403. 9138585
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Superfine, R., M.R. Falvo, S. Paulson, S. Washburn, R.M.T. II, G.J. Clary, V. Chi, and J. Frederick P. Brooks. Manipulation of Nanometer Objects: Friction, Mechanical Properties and Devices. in Proceedings of the International Conference on Novel Materials. 1997. Puri, India.
Taylor II, R.M. Programming Force Feedback Devices in Computer Graphics Systems. in Course notes for SIGGRAPH ’97 Course Notes #29, “Programming Virtual Worlds”. 1997.
Taylor II, R.M., J. Chen, S. Okimoto, N. Llopis-Artime, V.L. Chi, J. Frederick P. Brooks, M. Falvo, S. Paulson, P. Thiansathaporn, D. Glick, S. Washburn, and R. Superfine. Pearls Found on the way to the Ideal Interface for Scanned-probe Microscopes. in Proceedings of IEEE Visualization ’97. 1997. Phoenix, AZ: IEEE Computer Society Press.
1996
Bailey, M., D. Johnson, T. Massie, and R.M.T. II. So Real I Can Almost Touch It: The Use of Touch as an I/O Device for Graphics and Visualization. in SIGGRAPH ’96 Course Notes #37. 1996.
Falvo, M., M. Finch, V. Chi, S. Washburn, R.M. Taylor II, F.P. Brooks Jr., and R. Superfine. The Nanomanipulator: A Teleoperator for Manipulating Materials at the Nanometer Scale. in Proceedings of the 5th International Symposium on the Science and Engineering of Atomically Engineered Materials. 1996. Richmond, VA: World Scientific Publishing.
Mark, W., S. Randolph, M. Finch, J.V. Verth, and R.M.T. II. Adding Force Feedback to Graphics Systems: Issues and Solutions. in Computer Graphics: Proceedings of SIGGRAPH ’96. 1996.
1995
Finch, M., V. Chi, R.M. Taylor II, M. Falvo, S. Washburn, and R. Superfine. Surface Modification Tools in a Virtual Environment Interface to a Scanning Probe Microscope. in Computer Graphics: Proceedings of the ACM Symposium on Interactive 3D Graphics. 1995. Monterey, CA: ACM-SIGGRAPH.
1994
Taylor II, R.M. and V.L. Chi. Take a walk on the image with virtual-reality microscope display. Laser Focus World. 1994(May): p. 145-149.
Taylor II, R.M., R.S. Williams, V.L. Chi, G. Bishop, J. Fletcher, W. Robinett, and S. Washburn. Nanowelding: Tip response during STM modification of Au surfaces. Surf. Sci. Lett.. 1994. 306(1 & 2): p. 534-538.
Taylor II, R.M. The Nanomanipulator: A Virtual-Reality Interface to a Scanning Tunneling Microscope, in Computer Science 1994, University of North Carolina: Chapel Hill p.139
1993
Taylor II, R.M., W. Robinett, V.L. Chi, J. Frederic P. Brooks, W.V. Wright, R.S. Williams, and E.J. Snyder. The Nanomanipulator: A Virtual-Reality Interface for a Scanning Tunneling Microscope. in SIGGRAPH 93. 1993. Anaheim, California: ACM SIGGRAPH.
1992
Leech, J. and R.M. Taylor II. Interactive Modeling Using Particle Systems. in 2nd Discrete Element Methods Using Particle Systems. 1992. MIT.
Robinett, W., R.M. Taylor II, V.L. Chi, W.V. Wright, J. Brooks, F.P., R.S. Williams, and E.J. Snyder. The Nanomanipulator: An Atomic-Scale Teleoperator. in SIGGRAPH. 1992.
Hudson, T., A. Helser, D.H. Sonnenwald, and M.C. Whitton. The distributed nanoManipulator: A tool for collaborative science. p. 7.
Sonnenwald, D.H. and L. Bin. Scientific collaboratories in higher education: Exploring learning style preferences, outcomes, and perceptions. p. 45.
Taylor II, R.M., Haptics for Scientific Visualization, in Human and Machine Haptics, M.A. Srinivasan, Editor, MIT Press.