Workshop Lab Tutorials

• Fibrin-Stretching Lab
• AFM_Imaging_Viruses with Asylum_Lab
• Microfluidics Lab
• 3DFM:  Cell Mechanics Lab
• Diffusion In Fibrin Clots Lab
• High Throughput Thermal Microbead Rheology Lab
  
• Optical Tweezers Lab

Software Tutorials

Tutorials are available online for the following CISMM-sponsored software.

ImageSurfer

• ImageSurfer 2 Tutorials
• Dendritic Spines
• Volume Rendering

ImageTracker

• Image Stabilization
• Removal of Stationary Image Components

Microscope Simulator

• Simulating a Fluorescent Bead

Video Optimizer

• Actin Motility
• Spindle Dynamics

Video Spot Tracker

• Bead Rheology
• Bead attached to cilia against background of cells
• Magnetic Bead Calibration
• Rod-shaped Bacteria Tracking
• Kymograph

Edge Detector 1D

• Finding edges in a FRET sample

Template-Based Matching

• Distribution of angles in dimer proteins

PlotExtractor

• Recovering data from a published plot

Network Extractor

• Calculate fiber segment orientation histograms from a 3D image of fibrin

Landmark/Fiducial based Registration Toolbox

• http://cismm.cs.unc.edu/resources/tutorials/landmarkfiducial-based-registration-toolbox/